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4
StandEnA: a customizable workflow for standardized annotation and generating a presence-absence matrix of proteins. 미리보기

학술저널

issue
Bioinformatics advances [Bioinform Adv] 2023 Jun 09; Vol. 3 (1), pp. vbad069. Date of Electronic Publication: 2023 Jun 09 (Print Publication: 2023).
Author
Chafra F; Department of Environmental Microbiology, Helmholtz Centre for Environmental Research-UFZ, Leipzig 04318, Germany.; Department of Molecular Biology and Genetics, Bilkent University, Ankara 06800, Turkey.
Borim Correa F; Department of Environmental Microbiology, Helmholtz Centre for Environmental Research-UFZ, Leipzig 04318, Germany.; Department of Computer Science and Interdisciplinary Center of Bioinformatics, University of Leipzig, Leipzig 04107, Germany.
Oni F; Department of Environmental Microbiology, Helmholtz Centre for Environmental Research-UFZ, Leipzig 04318, Germany.; Department of Computer Science and Interdisciplinary Center of Bioinformatics, University of Leipzig, Leipzig 04107, Germany.
Konu Karakayalı Ö; Department of Molecular Biology and Genetics, Bilkent University, Ankara 06800, Turkey.; Interdisciplinary Program in Neuroscience, Bilkent University, Ankara 06800, Turkey.; UNAM-Institute of Materials Science and Nanotechnology, Bilkent University, Ankara 06800, Turkey.
Stadler PF; Department of Computer Science and Interdisciplinary Center of Bioinformatics, University of Leipzig, Leipzig 04107, Germany.; Interdisciplinary Center for Bioinformatics, German Center for Integrative Biodiversity Research (iDiv) Halle-Jena-Leipzig, Competence Center for Scalable Data Services and Solutions, Leipzig Research Center for Civilization Diseases, Leipzig Research Center for Civilization Diseases (LIFE), University of Leipzig, Leipzig 04109, Germany.; Max Planck Institute for Mathematics in the Sciences, Leipzig 04103, Germany.; Institute for Theoretical Chemistry, University of Vienna, Vienna 1090, Austria.; Facultad de Ciencias, Universidad National de Colombia, Sede Bogotá 111711, Colombia.; Santa Fe Institute, Santa Fe, NM 87501, USA.
Nunes da Rocha U; Department of Environmental Microbiology, Helmholtz Centre for Environmental Research-UFZ, Leipzig 04318, Germany.; Department of Computer Science and Interdisciplinary Center of Bioinformatics, University of Leipzig, Leipzig 04107, Germany.
DB Label
Database : MEDLINE
원문보기
Open Access (PubMed Central) 
7
MarineMetagenomeDB: a public repository for curated and standardized metadata for marine metagenomes. 미리보기

학술저널

issue
Environmental microbiome [Environ Microbiome] 2022 Nov 18; Vol. 17 (1), pp. 57. Date of Electronic Publication: 2022 Nov 18.
Author
Nata'ala MK; Department of Environmental Microbiology, Helmholtz Centre for Environmental Research - UFZ GmbH, 04318, Leipzig, Saxony, Germany.; Department of Computer Science and Interdisciplinary Centre of Bioinformatics, University of Leipzig, 04107, Leipzig, Saxony, Germany.
Avila Santos AP; Department of Environmental Microbiology, Helmholtz Centre for Environmental Research - UFZ GmbH, 04318, Leipzig, Saxony, Germany.; Institute of Mathematics and Computer Sciences, University of Sao Paulo, São Carlos, Brazil.
Coelho Kasmanas J; Department of Environmental Microbiology, Helmholtz Centre for Environmental Research - UFZ GmbH, 04318, Leipzig, Saxony, Germany.; Department of Computer Science and Interdisciplinary Centre of Bioinformatics, University of Leipzig, 04107, Leipzig, Saxony, Germany.; Institute of Mathematics and Computer Sciences, University of Sao Paulo, São Carlos, Brazil.
Bartholomäus A; Section 3.7 Geomicrobiology, GFZ German Research Centre for Geosciences, 14473, Telegrafenberg, Potsdam, Germany.
Saraiva JP; Department of Environmental Microbiology, Helmholtz Centre for Environmental Research - UFZ GmbH, 04318, Leipzig, Saxony, Germany.
Godinho Silva S; Department of Bioengineering and Institute for Bioengineering and Biosciences, Instituto Superior Técnico, Universidade de Lisboa, 1049-001, Lisbon, Portugal.
Keller-Costa T; Department of Bioengineering and Institute for Bioengineering and Biosciences, Instituto Superior Técnico, Universidade de Lisboa, 1049-001, Lisbon, Portugal.
Costa R; Department of Bioengineering and Institute for Bioengineering and Biosciences, Instituto Superior Técnico, Universidade de Lisboa, 1049-001, Lisbon, Portugal.
Gomes NCM; Department of Biology and Centre for Environmental and Marine Studies (CESAM), University of Aveiro, 3810-193, Aveiro, Portugal.
Ponce de Leon Ferreira de Carvalho AC; Institute of Mathematics and Computer Sciences, University of Sao Paulo, São Carlos, Brazil.
Stadler PF; Department of Computer Science and Interdisciplinary Centre of Bioinformatics, University of Leipzig, 04107, Leipzig, Saxony, Germany.
Sipoli Sanches D; Federal University of Technology - Paraná (UTFPR), Cornélio Procópio, Brazil. danilo.sipoli@gmail.com.
Nunes da Rocha U; Department of Environmental Microbiology, Helmholtz Centre for Environmental Research - UFZ GmbH, 04318, Leipzig, Saxony, Germany. ulisses.rocha@ufz.de.
DB Label
Database : MEDLINE
원문보기
Open Access (PubMed Central)  OA (Springer)  Open Access (BioMed Central)  조회 - Impact Factor (JCR)  등재 - Web of Science (SCIE)  등재 - SCOPUS 
8
Genome Mining Reveals High Biosynthetic Potential of Biocontrol Agent Bacillus velezensis B.BV10. 미리보기

학술저널

issue
Genes [Genes (Basel)] 2022 Oct 30; Vol. 13 (11). Date of Electronic Publication: 2022 Oct 30.
Author
Bertê R; Department of Microbiology, Universidade Estadual de Londrina, Londrina 86057-970, PR, Brazil.
Teixeira GM; Department of Microbiology, Universidade Estadual de Londrina, Londrina 86057-970, PR, Brazil.
de Oliveira JP; Department of Microbiology, Universidade Estadual de Londrina, Londrina 86057-970, PR, Brazil.
Nicoletto MLA; Department of Microbiology, Universidade Estadual de Londrina, Londrina 86057-970, PR, Brazil.
da Silva DV; Department of Microbiology, Universidade Estadual de Londrina, Londrina 86057-970, PR, Brazil.
de Godoy GG; Department of Microbiology, Universidade Estadual de Londrina, Londrina 86057-970, PR, Brazil.
Sanches DS; Computer Science Department, Universidade Tecnológica Federal do Paraná, Cornélio Procópio 86300000, PR, Brazil.
de Resende JTV; Department of Agronomy, Universidade Estadual de Londrina, Londrina 86057-970, PR, Brazil.
Pereira UP; Department of Preventive Veterinary Medicine, Universidade Estadual de Londrina, Londrina 86057-970, PR, Brazil.
Nunes da Rocha U; Department of Environmental Microbiology, Helmholtz Centre for Environmental Research-UFZ GmbH, 04318 Leipzig, Germany.
de Oliveira AG; Department of Microbiology, Universidade Estadual de Londrina, Londrina 86057-970, PR, Brazil.; Laboratory of Electron Microscopy and Microanalysis, Universidade Estadual de Londrina, Londrina 86057-970, PR, Brazil.
DB Label
Database : MEDLINE
원문보기
Open Access (PubMed Central)  조회 - Impact Factor (JCR)  등재 - Web of Science (SCIE)  등재 - SCOPUS 
10
Metagenomics-resolved genomics provides novel insights into chitin turnover, metabolic specialization, and niche partitioning in the octocoral microbiome. 미리보기

학술저널

issue
Microbiome [Microbiome] 2022 Sep 22; Vol. 10 (1), pp. 151. Date of Electronic Publication: 2022 Sep 22.
Author
Keller-Costa T; Institute for Bioengineering and Biosciences, Instituto Superior Técnico, University of Lisbon, Lisbon, Portugal. tinakellercosta@tecnico.ulisboa.pt.; Associate Laboratory i4HB - Institute for Health and Bioeconomy, Instituto Superior Técnico, University of Lisbon, Lisbon, Portugal. tinakellercosta@tecnico.ulisboa.pt.
Kozma L; Institute for Bioengineering and Biosciences, Instituto Superior Técnico, University of Lisbon, Lisbon, Portugal.; École Polytechnique Fédérale de Lausanne, Écublens, Switzerland.
Silva SG; Institute for Bioengineering and Biosciences, Instituto Superior Técnico, University of Lisbon, Lisbon, Portugal.; Associate Laboratory i4HB - Institute for Health and Bioeconomy, Instituto Superior Técnico, University of Lisbon, Lisbon, Portugal.
Toscan R; Helmholtz Centre for Environmental Research, Leipzig, Germany.
Gonçalves J; Centro de Ciências Do Mar, Universidade Do Algarve, Faro, Portugal.
Lago-Lestón A; Centro de Investigación Científica Y de Educación Superior de Ensenada, Ensenada, Mexico.
Kyrpides NC; Department of Energy, Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, CA, USA.
Nunes da Rocha U; Helmholtz Centre for Environmental Research, Leipzig, Germany.
Costa R; Institute for Bioengineering and Biosciences, Instituto Superior Técnico, University of Lisbon, Lisbon, Portugal. rodrigoscosta@tecnico.ulisboa.pt.; Associate Laboratory i4HB - Institute for Health and Bioeconomy, Instituto Superior Técnico, University of Lisbon, Lisbon, Portugal. rodrigoscosta@tecnico.ulisboa.pt.; Centro de Ciências Do Mar, Universidade Do Algarve, Faro, Portugal. rodrigoscosta@tecnico.ulisboa.pt.
DB Label
Database : MEDLINE
원문보기
Open Access (PubMed Central)  OA (Springer)  Open Access (BioMed Central)  조회 - Impact Factor (JCR)  등재 - Web of Science (SCIE)  등재 - SCOPUS 
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