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전체선택

BioSimulators: a central registry of simulation engines and services for recommending specific tools

보고서

Author: Shaikh, Bilal
Smith, Lucian P.
Vasilescu, Dan
Marupilla, Gnaneswara
Wilson, Michael
Agmon, Eran
Agnew, Henry
Andrews, Steven S.
Anwar, Azraf
Beber, Moritz E.
Bergmann, Frank T.
Brooks, David
Brusch, Lutz
Calzone, Laurence
Choi, Kiri
Cooper, Joshua
Detloff, John
Drawert, Brian
Dumontier, Michel
Ermentrout, G. Bard
Faeder, James R.
Freiburger, Andrew P.
Fröhlich, Fabian
Funahashi, Akira
Garny, Alan
Gennari, John H.
Gleeson, Padraig
Goelzer, Anne
Haiman, Zachary
Hellerstein, Joseph L.
Hoops, Stefan
Ison, Jon C.
Jahn, Diego
Jakubowski, Henry V.
Jordan, Ryann
Kalaš, Matúš
König, Matthias
Liebermeister, Wolfram
Mandal, Synchon
McDougal, Robert
Medley, J. Kyle
Mendes, Pedro
Müller, Robert
Myers, Chris J.
Naldi, Aurelien
Nguyen, Tung V. N.
Nickerson, David P.
Olivier, Brett G.
Patoliya, Drashti
Paulevé, Loïc
Petzold, Linda R.
Priya, Ankita
Rampadarath, Anand K.
Rohwer, Johann M.
Saglam, Ali S.
Singh, Dilawar
Sinha, Ankur
Snoep, Jacky
Sorby, Hugh
Spangler, Ryan
Starruß, Jörn
Thomas, Payton J.
van Niekerk, David
Weindl, Daniel
Zhang, Fengkai
Zhukova, Anna
Goldberg, Arthur P.
Blinov, Michael L.
Sauro, Herbert M.
Moraru, Ion I.
Karr, Jonathan R.
DB Label: Database : arXiv

원문보기: Open Access (Arxiv)

SED-ML Validator: tool for debugging simulation experiments

보고서

Author: Shaikh, Bilal
Freiburger, Andrew Philip
König, Matthias
Bergmann, Frank T.
Nickerson, David P.
Sauro, Herbert M.
Blinov, Michael L.
Smith, Lucian P.
Moraru, Ion I.
Karr, Jonathan R.
DB Label: Database : arXiv

원문보기: Open Access (Arxiv)

Practical Resources for Enhancing the Reproducibility of Mechanistic Modeling in Systems Biology

보고서

Author: Blinov, Michael L.
Gennari, John H.
Karr, Jonathan R.
Moraru, Ion I.
Nickerson, David P.
Sauro, Herbert M.
DB Label: Database : arXiv

원문보기: Open Access (Arxiv)

SBML Level 3: an extensible format for the exchange and reuse of biological models.

학술저널

issue: Molecular systems biology. 16(8)
Author: Keating, Sarah M
Waltemath, Dagmar
König, Matthias
Zhang, Fengkai
Dräger, Andreas
Chaouiya, Claudine
Bergmann, Frank T
Finney, Andrew
Gillespie, Colin S
Helikar, Tomáš
Hoops, Stefan
Malik-Sheriff, Rahuman S
Moodie, Stuart L
Moraru, Ion I
Myers, Chris J
Naldi, Aurélien
Olivier, Brett G
Sahle, Sven
Schaff, James C
Smith, Lucian P
Swat, Maciej J
Thieffry, Denis
Watanabe, Leandro
Wilkinson, Darren J
Blinov, Michael L
Begley, Kimberly
Faeder, James R
Gómez, Harold F
Hamm, Thomas M
Inagaki, Yuichiro
Liebermeister, Wolfram
Lister, Allyson L
Lucio, Daniel
Mjolsness, Eric
Proctor, Carole J
Raman, Karthik
Rodriguez, Nicolas
Shaffer, Clifford A
Shapiro, Bruce E
Stelling, Joerg
Swainston, Neil
Tanimura, Naoki
Wagner, John
Meier-Schellersheim, Martin
Sauro, Herbert M
Palsson, Bernhard
Bolouri, Hamid
Kitano, Hiroaki
Funahashi, Akira
Hermjakob, Henning
Doyle, John C
Hucka, Michael
SBML Level 3 Community members
DB Label: Database : eScholarship

원문보기: Open Access (eScholarship)

Kinetic Modeling Using BioPAX Ontology

회의자료

issue: 2007 IEEE International Conference on Bioinformatics and Biomedicine (BIBM 2007) Bioinformatics and Biomedicine, 2007. BIBM 2007. IEEE International Conference on. :339-348 Nov, 2007
Author: Ruebenacker, Oliver
Moraru, Ion I.
Schaff, James C.
Blinov, Michael L.
DB Label: Database : IEEE Xplore Digital Library

원문보기: Full Text (IEEE)

XML Encoding of Features Describing Rule-Based Modeling of Reaction Networks with Multi-Component Molecular Complexes

회의자료

issue: 2007 IEEE 7th International Symposium on BioInformatics and BioEngineering Bioinformatics and Bioengineering, 2007. BIBE 2007. Proceedings of the 7th IEEE International Conference on. :987-994 Oct, 2007
Author: Blinov, Michael L.
Moraru, Ion I.
DB Label: Database : IEEE Xplore Digital Library

원문보기: Full Text (IEEE)

Morphological Control of Inositol-1,4,5-Trisphosphate-Dependent Signals

학술저널

issue: The Journal of Cell Biology, 1999 Nov . 147(5), 929-935.
Author: Fink, Charles C.
Slepchenko, Boris
Moraru, Ion I.
Schaff, James
Watras, James
Loew, Leslie M.
DB Label: Database : JSTOR Journals

원문보기: 조회 - Impact Factor (JCR) 등재 - Web of Science (SCIE) 등재 - SCOPUS 원문복사신청 - FRIC

Correction to: Meeting report from the fourth meeting of the Computational Modeling in Biology Network (COMBINE)

학술저널

issue: Standards in Genomic Sciences. 13(1)
Author: Waltemath, Dagmar^Aff1
Bergmann, Frank T.
Chaouiya, Claudine
Czauderna, Tobias
Gleeson, Padraig
Goble, Carole
Golebiewski, Martin
Hucka, Michael
Juty, Nick
Krebs, Olga
Le Novère, Nicolas^{Aff8, Aff14}
Mi, Huaiyu
Moraru, Ion I.
Myers, Chris J.
Nickerson, David
Olivier, Brett G.
Rodriguez, Nicolas
Schreiber, Falk^{Aff3, Aff15, Aff16}
Smith, Lucian
Zhang, Fengkai
Bonnet, Eric^{Aff18, Aff19, Aff20}
DB Label: Database : Springer Nature Journals

원문보기: Open Access (BioMed Central) 등재 - SCOPUS

Leveraging Modeling Approaches: Reaction Networks and Rules

전자책

issue: Advances in Systems Biology. 736:517-530
Author: Blinov, Michael L.^Aff1_30
Moraru, Ion I.^Aff1_30
DB Label: Database : Springer Nature eBooks

원문보기

Modeling without Borders: Creating and Annotating VCell Models Using the Web

전자책

issue: Bioinformatics Research and Applications : 6th International Symposium, ISBRA 2010, Storrs, CT, USA, May 23-26, 2010. Proceedings. 6053:3-17
Author: Blinov, Michael L.^Aff23
Ruebenacker, Oliver^Aff23
Schaff, James C.^Aff23
Moraru, Ion I.^Aff23
DB Label: Database : Springer Nature eBooks

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